EpiModel
EpiModel is an R package that provides tools for simulating and analyzing mathematical models of infectious disease dynamics. Supported epidemic model classes include deterministic compartmental models, stochastic individual contact models, and stochastic network models. Disease types include SI, SIR, and SIS epidemics with and without demography, with utilities available for expansion to construct and simulate epidemic models of arbitrary complexity. [1]
  • The network model class is based on the statistical framework of temporal exponential random graph models (ERGMs) implemented in the Statnet suite of software for R. [1]
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Link[1] EpiModel - Mathematical Modeling of Infectious Disease Dynamics

Zitiert von: David Price 10:44 PM 30 January 2023 GMT
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Link[2] EpiModel: An R Package for Mathematical Modeling of Infectious Disease over Networks

Zitieren: Samuel M. Jenness, Steven M. Goodreau, Martina Morris
Publication date: 20 April 2018
Publication info: Journal of Statistical Software. 2018; 84(8): 1-47.
Zitiert von: David Price 10:50 PM 30 January 2023 GMT
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DOI: https://doi.org/10.18637/jss.v084.i08
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Package EpiModel provides tools for building, simulating, and analyzing mathematical models for the population dynamics of infectious disease transmission in R. Several classes of models are included, but the unique contribution of this software package is a general stochastic framework for modeling the spread of epidemics on networks. EpiModel integrates recent advances in statistical methods for network analysis (temporal exponential random graph models) that allow the epidemic modeling to be grounded in empirical data on contacts that can spread infection. This article provides an overview of both the modeling tools built into EpiModel, designed to facilitate learning for students new to modeling, and the application programming interface for extending package EpiModel, designed to facilitate the exploration of novel research questions for advanced modelers.
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Immediately related elementsHow this works
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EIDM  »EIDM 
Software »Software
Software languages »Software languages
R »R
R Packages »R Packages
EpiModel
R Epidemics Consortium (RECON) »R Epidemics Consortium (RECON)