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Genomics
Tags: Genome, genomes, Genetics, Genes, Genetic
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Explain
⌅
EIDM
EIDM ☜The Emerging Infectious Diseases Modelling Initiative (EIDM) – by the Public Health Agency of Canada and NSERC – aims to establish multi-disciplinary network(s) of specialists across the country in modelling infectious diseases to be applied to public needs associated with emerging infectious diseases and pandemics such as COVID-19. [1]☜F1CEB7
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Research interests
Research interests☜☜9FDEF6
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Genomics
Genomics☜☜9FDEF6
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Genomics
Genomics☜While virus genomes can describe the global context of introductions and origins of local clusters of cases, CANMOD will focus on building methods for characterizing and modelling local transmission once it is established, and for surveillance for viral determinants of increased fitness and of enhanced risk of spillover, virulence and transmission.☜FFFACD
⇤
Christina Davy
Christina Davy☜Assistant Professor, Department of Biology, Carleton University; Adjunct Professor at Trent University.☜FFFACD
⇤
Gary Van Domselaar
Gary Van Domselaar☜Dr. Gary Van Domselaar, PhD (University of Alberta, 2003) is the Chief of the Bioinformatics Laboratory at the National Microbiology Laboratory in Winnipeg Canada, and Adjunct Professor in the Department of Medical Microbiology at the University of Manitoba.☜FFFACD
⇤
Jesse Shapiro
Jesse Shapiro☜Jesse Shapiro is an Associate Professor in the Faculty of Medicine and Health Sciences at McGill University. Jesse’s research uses genomics to understand the ecology and evolution of microbes, ranging from freshwater bacterioplankton to the human gut microbiome. His work has helped elucidate the origins of bacterial species, leading to a more unified species concept across domains of life, and has developed genome-wide association study (GWAS) methods tailored for bacteria.☜FFFACD
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Natalie Anne Prystajecky
Natalie Anne Prystajecky☜Natalie Prystajecky is the program head for the Environmental Microbiology program at the BCCDC Public Health Laboratory. She is also a clinical associate professor in the Department of Pathology & Laboratory Medicine at UBC.☜FFFACD
⇤
Nicole Ricker
Nicole Ricker☜Assistant Professor in the Department of Pathobiology, Ontario Veterinary College, University of Guelph.☜FFFACD
⇤
Rafal Kustra
Rafal Kustra☜Associate Professor in the Biostatistics Division of the Department of Public Health Sciences at the University of Toronto, and an Adjunct Professor in the Department of Statistical Sciences at the University of Toronto.☜FFFACD
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Samira Mubareka
Samira Mubareka☜Samira Mubareka is currently a virologist, medical microbiologist and infectious disease physician at Sunnybrook Health Sciences Centre in Toronto, Ontario, Canada and in the Department of Laboratory Medicine and Pathobiology at the University of Toronto.☜FFFACD
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Sandrine Moreira
Sandrine Moreira☜Sandrine Moreira is the lead genomics for SARS-CoV-2 at the Laboratoire de Santé Publique du Québec (LSPQ) and is associate professor in the Department of Biochemistry and Molecular Medicine at the Université de Montreal. She has advanced expertise in microbial genomics that she acquired in cutting-edge research institutes, at the Institut Pasteur in Paris and in Columbia University in New York.☜FFFACD
⇤
Sarah Otto
Sarah Otto☜Professor in Zoology. Theoretical biologist, Canada Research Chair in Theoretical and Experimental Evolution, and Killam Professor at the University of British Columbia.☜FFFACD
⇤
Lloyd T. Elliott
Lloyd T. Elliott☜Assistant Professor, Statistics and Actuarial Science at Simon Fraser University.☜FFFACD
⇤
Caroline Colijn
Caroline Colijn☜Dr. Caroline Colijn works at the interface of mathematics, evolution, infection and public health, and leads the MAGPIE research group. She joined SFUs Mathematics Department in 2018 as a Canada 150 Research Chair in Mathematics for Infection, Evolution and Public Health. She has broad interests in applications of mathematics to questions in evolution and public health, and was a founding member of Imperial College Londons Centre for the Mathematics of Precision Healthcare.☜FFFACD
⇤
David Earn
David Earn☜Professor of Mathematics and Faculty of Science Research Chair in Mathematical Epidemiology at McMaster University.☜FFFACD
⇤
Jonathan Dushoff
Jonathan Dushoff☜Professor in the Department Of Biology at McMaster University.☜FFFACD
⇤
Michael WZ Li
Michael WZ Li☜Michael Li is Senior Scientist in the Public Health Risk Science Division (PHRS) of the Public Health Agency of Canada (PHAC) and a Research Associate at the South African Centre for Epidemiological Modelling and Analysis (SACEMA).☜FFFACD
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Sana Naderi
Sana Naderi☜Sana is a PhD student in the Shapiro Lab in the McGill Genome Center and the Department of Microbiology and Immunology at McGill University.☜FFFACD
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Nick Ogden
Nick Ogden☜Nicholas Ogden is a senior research scientist and Director of the Public Health Risk Sciences Division within the National Microbiology Laboratory at the Public Health Agency of Canada.☜FFFACD
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Venkata Duvvuri
Venkata Duvvuri☜Dr. Duvvuri is an Assistant Professor and leads an interdisciplinary research program advancing genomic surveillance research, development, and practice in the Department of Laboratory Medicine & Pathobiology at the University of Toronto. He is also a Scientist in Machine Learning at Public Health Ontario.☜FFFACD
⇤
Cedric Chauve
Cedric Chauve☜Professor in the Department of Mathematics at Simon Fraser University.☜FFFACD
⇤
Troy Day
Troy Day☜Troy Day is a Professor and the Associate Head of the Department of Mathematics and Statistics at Queen’s University. He is an applied mathematician whose research focuses on dynamical systems, optimization, and game theory, applied to models of infectious disease dynamics and evolutionary biology.☜FFFACD
⇥
Covid-19
Covid-19☜☜FFFACD
⇥
23/11/16 Ben Ashby
23/11/16 Ben Ashby☜Antigenic evolution of SARS-CoV-2 in immunocompromised hosts.☜FFFACD
⇥
plASgraph2
plASgraph2☜Classifying Plasmid Contigs From Bacterial Assembly Graphs Using Graph Neural Networks.☜FFFACD
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Agent-based models
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Digital Twins☜“A digital twin is a digital model of an intended or actual real-world physical product, system, or process (a physical twin) that serves as the effectively indistinguishable digital counterpart of it for practical purposes, such as simulation, integration, testing, monitoring, and maintenance.” [1]☜9FDEF6
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Markov chain☜Markov chain Monte Carlo methods (McMC)☜9FDEF6
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mpox
mpox☜☜9FDEF6
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Neisseria meningitidis
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Entry date (GMT):
3/8/2023 11:14:00 PM
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